RNApasta: Statistics and editing of RNA multiple structural alignments
Overview
RNApasta is RNApasta is a Java application to calculate a variety of useful statistics related to RNA stem-loop and pseudoknot structures. It will also perform functions related to alignment editing. The input data may be in a "pasta" formatted file, a variant of the fasta format, or in a Stockholm formatted files as downloaded from the Rfam database.
Download
RNApasta is coded in Java and has been tested on Windows and Linux computers. It is available either as a precompiled java archive file (.jar) which is ready to run, or as source code which can be compiled.
- RNApasta.jar-1.6.zip This version is compiled with the java 1.6 development kit.
- RNApasta.jar-1.5.zip This version is compiled with the java 1.5 development kit.
- RNApasta.src.zip These are the source code files.
- RNApasta.readme.txt The ReadMe file.
- RNApasta.help.html An HTML help file.
Citation
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